Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 9772
Gene Symbol: TMEM94
TMEM94
0.100 CausalMutation disease CLINVAR
Entrez Id: 2261
Gene Symbol: FGFR3
FGFR3
0.120 AlteredExpression disease BEFREE The expression patterns of IHH (Indian hedgehog) and FGFR3 (Fibroblast Growth Factor Receptor 3) were similar with transcripts expressed throughout osteochondromas. 16476576 2006
Entrez Id: 5573
Gene Symbol: PRKAR1A
PRKAR1A
0.110 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 AlteredExpression disease BEFREE The EXT genes, involved in the hereditary multiple osteochondromas syndrome, and downregulated in osteochondroma, were normally expressed in DEH and MC as shown by quantitative reverse transcriptase-polymerase chain reaction (qPCR). 16622899 2006
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 AlteredExpression disease BEFREE Reduced EXT1 or EXT2 expression in osteochondromas is associated with disordered cellular distribution of HSPGs, resulting in defective endochondral ossification which is likely to be involved in the formation of osteochondromas. 18853760 2008
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 AlteredExpression disease BEFREE Reduced EXT1 or EXT2 expression in osteochondromas is associated with disordered cellular distribution of HSPGs, resulting in defective endochondral ossification which is likely to be involved in the formation of osteochondromas. 18853760 2008
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 AlteredExpression disease BEFREE The current study attempts to compare the pathology between EXT1 gene expression in humans and surgically created osteochondroma pathology in a rat model. 12645631 2003
Entrez Id: 2132
Gene Symbol: EXT2
EXT2
0.100 AlteredExpression disease BEFREE We investigated the expression of EXT1 and EXT2 (quantitative RT-PCR) and of different HSPGs (immunohistochemistry) in solitary and hereditary osteochondromas and in cases with malignant progression to secondary peripheral chondrosarcoma, in relation to possible mutations and promoter methylation. 17226760 2007
Entrez Id: 2131
Gene Symbol: EXT1
EXT1
0.100 AlteredExpression disease BEFREE We investigated the expression of EXT1 and EXT2 (quantitative RT-PCR) and of different HSPGs (immunohistochemistry) in solitary and hereditary osteochondromas and in cases with malignant progression to secondary peripheral chondrosarcoma, in relation to possible mutations and promoter methylation. 17226760 2007
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.040 AlteredExpression disease BEFREE Up-regulation of PTHrP and Bcl-2 characterizes malignant transformation of osteochondroma because PTHrP and Bcl-2 expression is significantly higher in borderline and grade I peripheral chondrosarcomas compared with osteochondromas. 11140704 2000
Entrez Id: 596
Gene Symbol: BCL2
BCL2
0.040 AlteredExpression disease BEFREE In summary, surgically created osteochondromas lack the massive and continuous population of mesenchymal stem cells with Bcl2 expression. 12645631 2003
Entrez Id: 5744
Gene Symbol: PTHLH
PTHLH
0.020 AlteredExpression disease BEFREE The expression of PTHrP, PTHrP-receptor, Bcl-2, FGF2, FGFR1, FGFR3, and p21 is investigated by immunohistochemistry in osteochondromas (n = 24) and peripheral (n = 29) and central (n = 20) chondrosarcomas. 11140704 2000
Entrez Id: 5111
Gene Symbol: PCNA
PCNA
0.020 AlteredExpression disease BEFREE <b>Methods:</b> The levels of HDAC4 and PCNA mRNA and protein were tested in human OS and osteochondroma (OC) tissues. 31552187 2019
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.020 AlteredExpression disease BEFREE COX-2 protein expression in osteosarcoma was higher than in benign osteochondroma (OR = 7.66, <i>P </i><<i> </i>0.001). 30761249 2019
Entrez Id: 5743
Gene Symbol: PTGS2
PTGS2
0.020 AlteredExpression disease BEFREE Based on the results, the expression of COX-2 and SUV in OS showed a higher strong reactivity rate compared with OC (73.3 vs. 25.0%, P=0.001; 63.3 vs. 30.0%, P=0.02), but it did not correlate with the clinicopathological characteristics of OS. 22922684 2012
Entrez Id: 3756
Gene Symbol: KCNH1
KCNH1
0.010 AlteredExpression disease BEFREE Furthermore, the polyclonal antibody was used to evaluate hEAG1 expression in 42 human osteosarcoma specimens and 19 osteochondromas specimens by immunohistochemistry. hEAG1 was expressed in 71.4% (30/42) osteosarcoma, and 15.8% (3/19) osteochondromas. 22248279 2012
Entrez Id: 10641
Gene Symbol: NPRL2
NPRL2
0.010 AlteredExpression disease BEFREE We found that 18 cases (37.5%) of osteosarcoma and 27 cases (67.5%) of osteochondroma showed positive NPRL2 expression. 23321467 2013
Entrez Id: 574506
Gene Symbol: MIR503
MIR503
0.010 AlteredExpression disease BEFREE The median miR-503 expression level in osteosarcoma was two-fold lower than that in osteochondroma (median expression 6.4 and 13.09, respectively, P< 0.05). 30223385 2018
Entrez Id: 10418
Gene Symbol: SPON1
SPON1
0.010 AlteredExpression disease BEFREE Then we demonstrated that SPON1 was significantly up-regulated in 72 osteosarcoma specimens compared with benign osteochondroma samples and elevated SPON1 was positively correlated with MMP9 expression. 26032498 2015
Entrez Id: 846
Gene Symbol: CASR
CASR
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004
Entrez Id: 4513
Gene Symbol: COX2
COX2
0.010 AlteredExpression disease BEFREE COX-2 protein expression in osteosarcoma was higher than in benign osteochondroma (OR = 7.66, <i>P </i><<i> </i>0.001). 30761249 2019
Entrez Id: 2719
Gene Symbol: GPC3
GPC3
0.010 AlteredExpression disease BEFREE Decreased EXT expression and intracellular accumulation of heparan sulphate proteoglycan in osteochondromas and peripheral chondrosarcomas. 17226760 2007
Entrez Id: 9759
Gene Symbol: HDAC4
HDAC4
0.010 AlteredExpression disease BEFREE <b>Methods:</b> The levels of HDAC4 and PCNA mRNA and protein were tested in human OS and osteochondroma (OC) tissues. 31552187 2019
Entrez Id: 3549
Gene Symbol: IHH
IHH
0.010 AlteredExpression disease BEFREE The expression patterns of IHH (Indian hedgehog) and FGFR3 (Fibroblast Growth Factor Receptor 3) were similar with transcripts expressed throughout osteochondromas. 16476576 2006
Entrez Id: 407
Gene Symbol: ARR3
ARR3
0.010 AlteredExpression disease BEFREE CAR mRNA was expressed at high levels in osteosarcoma, Ewing's sarcoma, neurofibroma, and schwannoma; at intermediate levels in exostosis, giant cell tumor, liposarcoma, synovial sarcoma, malignant peripheral nerve sheath tumor, and hemangioma; and at low levels in alveolar soft part sarcoma and desmoid. 15173092 2004